[lukasz cwiklik]

computational molecular biophysics

J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague

Publications

Journal publications

    2017

  • [68] A. Stachowicz-Kusnierz, L. Cwiklik, J. Korchowiec, B. Korchowiec, The impact of lipid oxidation on functioning of a lung surfactant model
    submitted
  • [67] M. Olsinova, P. Jurkiewicz, J. Sykora, J. Sabo, M. Hof, L. Cwiklik, M. Cebecauer, The impact of a simple alpha-helical transmembrane peptide on lipid membrane dynamics
    submitted
  • [66] M. Javanainen, A. Lamberg, L. Cwiklik, I. Vattulainen, S. Ollila, Atomistic Model for Near-Quantitative Simulations of Langmuir Monolayers
    Langmuir 2017, accepted
  • [65] A. Wizert, D.R. Iskander, L. Cwiklik, Interaction of lysozyme with a tear film lipid layer model: a molecular dynamics simulation study
    BBA Biomembranes 2017, accepted
    DOI: 10.1016/j.bbamem.2017.08.015
    PDF preprint
  • [64] M. Golda-Cepa, W. Kulig, L. Cwiklik, A. Kotarba, Molecular dynamics insights into water-parylene C interface - relevance of oxygen plasma treatment for biocompatibility
    ACS Applied Materials & Interfaces 2017, 9, 16685-16693.
    DOI: 10.1021/acsami.7b03265
  • [63] A. Stachowicz-Kusnierz, S. Trojan, L. Cwiklik, B. Korchowiec, J. Korchowiec, Modeling Lung Surfactant Interactions with Benzo[a]pyrene
    Chemistry - A European Journal 2017, 23, 5307-5316.
    DOI: 10.1002/chem.201605945
  • [62] G. Licari, L. Cwiklik, P. Jungwirth, E. Vauthey, Exploring Fluorescent Dyes at Biomimetic Interfaces with Second Harmonic Generation and Molecular Dynamics
    Langmuir 2017, 33, 3373-3383.
    DOI: 10.1021/acs.langmuir.7b00403
    PDF preprint
  • [61] E. Bilkova, R. Pleskot, S. Rissanen, S. Sun, A. Czogalla, L. Cwiklik, T. Rog, I. Vattulainen, P.S. Cremer, P. Jungwirth, U. Coskun, Calcium directly regulates phosphatidylinositol 4,5-bisphosphate head group conformation and recognition
    Journal of the American Chemical Society 2017, 139, 4019-4024.
    DOI: 10.1021/jacs.6b11760
    PDF preprint
  • [60] K. Riedlova, M. Nekardova, P. Kacer, K. Syslova, M. Vazdar, P. Jungwirth, E. Kudova, L. Cwiklik, Distributions of Therapeutically Promising Steroids in Cellular Membranes
    Chemistry and Physics of Lipids 2017, 203, 78-86.
    DOI: 10.1016/j.chemphyslip.2016.12.004
    PDF preprint
  • [59] A. Olzynska, L. Cwiklik, Bahavior of sphingomyelin and ceramide in a tear film lipid layer model (invited paper)
    Annals of Anatomy 2017, 210, 129-134.
    DOI: 10.1016/j.aanat.2016.10.005
    PDF preprint
  • 2016

  • [58] A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers
    Scientific Reports 2016, 6, 38035.
    DOI: 10.1038/srep38035
  • [57] A. Olzynska, M. Zubek, M. Roeselova, J. Korchowiec, L. Cwiklik, Mixed DPPC/POPC Monolayers: All-atom Molecular Dynamics Simulations and Langmuir Monolayer Experiments
    BBA Biomembranes 2016, 12, 3120-3130.
    DOI: 10.1016/j.bbamem.2016.09.015
  • [56] B. Bloch, R. Pleskot, P. Pejchar, M. Potocky, P. Trpkosova, L. Cwiklik, N. Vukasinovic, H. Sternberg, S. Yalovsky, V. Zarsky, Exocyst SEC3 and phosphoinositides define sites of exocytosis in pollen tube initiation and growth
    Plant Physiology 2016, 172, 980-1002.
  • DOI: ​10.​1104/​pp.​16.​00690
  • [55] R. Perkins, A. Kukharchuk, P. Delcroix, R. Shoemaker, M. Roeselova, L. Cwiklik, V. Vaida, The Partitioning of Small Aromatic Molecules to Air-Water and Phospholipid Interfaces Mediated by Non-Hydrophobic Interactions
    Journal of Physical Chemistry B 2016, 120, 7408-7422.
    DOI: 10.1021/acs.jpcb.6b05084
  • [54] W. Kulig, L. Cwiklik, P. Jurkiewicz, T. Rog, I. Vattulainen, Cholesterol oxidation products and their biological importance (review paper)
    Chemistry and Physics of Lipids 2016, 199, 144-160.
    DOI: 10.1016/j.chemphyslip.2016.03.001
  • [53] L. Cwiklik, Tear film lipid layer: a molecular level view (review paper)
    BBA Biomembranes 2016, 10, 2421-2430.
    DOI: 10.1016/j.bbamem.2016.02.020
  • 2015

  • [52] A. Habartova, M. Roeselova, L. Cwiklik, Investigation of mixed surfactant films at water surface using molecular dynamics simulations
    Langmuir 2015, 31, 11508-11515.
    DOI: 10.1021/acs.langmuir.5b02854
  • [51] A. Nikouee, M. Khabiri, L. Cwiklik, Scorpion toxins prefer salt solutions
    Journal of Molecular Modeling 2015, 21, 287.
    DOI: 10.1007/s00894-015-2822-y
  • [50] W. Kulig, A. Olzynska, P. Jurkiewicz, A. Kantola, S. Komulainen, M. Manna, M. Pourmousa, M. Vazdar, L. Cwiklik, T. Róg, G. Khelashvili, D. Harries, Daniel; V.-V. Telkki, M. Hof, I. Vattulainen, P. Jungwirth, Cholesterol under oxidative stress – how lipid membranes sense oxidation as cholesterol is being replaced by oxysterols
    Free Radical Biology & Medicine 2015, 84, 30-41.
    DOI: 10.1016/j.freeradbiomed.2015.03.006
  • [49] E. Griffith, R. Perkins, D.-M. Telesford, E. Adams, L. Cwiklik, H. Allen, M. Roeselova, V. Vaida, Interaction of L-phenylalanine with a Phospholipid Monolayer at the Water-Air Interface
    Journal of Physical Chemistry B 2015, 119, 9038–9048.
    DOI: 10.1021/jp508473w
  • [48] R. Pleskot, L. Cwiklik, P. Jungwirth, V. Zarsky, M. Potocky, Membrane targeting of the yeast exocyst complex
    BBA Biomembranes 2015, 1848, 1481-1489.
    DOI: 10.1016/j.bbamem.2015.03.026
  • 2014

  • [47] S. Pokorna, P. Jurkiewicz, M. Vazdar, L. Cwiklik, P. Jungwirth, M. Hof, Does fluoride disrupt hydrogen bond network in cationic lipid bilayer? Time-dependent fluorescence shift of Laurdan and MD simulations
    Journal of Chemical Physics 2014, 141, 22D516.
    DOI: 10.1063/1.4898798
  • [46] F. Stetter, L. Cwiklik, P. Jungwirth, T. Hugel, Single Lipid Extraction – The Anchoring Strength of Cholesterol in Liquid Ordered and Liquid Disordered Phases
    Biophysical Journal 2014, 107, 1167-1175.
    DOI: 10.1016/j.bpj.2014.07.018
  • [45] G. Forst, L. Cwiklik, P. Jurkiewicz, R. Schubert, M. Hof, Interactions of beta-blockers with model lipid membranes: Molecular view of the interaction of acebutolol, oxprenolol, and propranolol with phosphatidylcholine vesicles by time-dependent fluorescence shift and molecular dynamics simulations
    European Journal of Pharmaceutics and Biopharmaceutics 2014, 87, 559-569.
    DOI: 10.1016/j.ejpb.2014.03.013
  • [44] A. Wizert, D. R. Iskander, L. Cwiklik, Organization of Lipids in the Tear Film: A Molecular-Level View
    PLOS ONE 2014, 9, e92461.
    DOI: 10.1371/journal.pone.0092461
  • [43] M. Pederzoli, L. Sobek, J. Brabec, K. Kowalski, L. Cwiklik, J. Pittner, Fluorescence of PRODAN in Water: a Computational QM/MM MD Study
    Chemical Physics Letters 2014, 597, 57-62.
    DOI: 10.1016/j.cplett.2014.02.031
  • [42] M. Stefl, R. Sachl, A. Olzynska, M. Amaro, D. Savchenko, A. Deyneka, A. Hermetter, L. Cwiklik, J. Humpolickova, M. Hof, Comprehensive Portrait of Cholesterol Containing Oxidized Membrane
    BBA Biomembranes 2014, 1838, 1769–1776.
    DOI: 10.1016/j.bbamem.2014.02.006
  • [41] S. Timr, A. Bondar, L. Cwiklik, M. Stefl, M. Hof, M. Vazdar, J. Lazar, P. Jungwirth, Accurate determination of the orientational distribution of a fluorescent molecule in a phospholipid membrane
    Journal of Physical Chemistry B 2014, 118, 855-863.
    DOI: 10.1021/jp4067026
  • 2013

  • [40] M. Vazdar, E. Wernersson, M. Khabiri, L. Cwiklik, P. Jurkiewicz, M. Hof, E. Mann, S. Kolusheva, R. Jelinek, P. Jungwirth, Aggregation of Oligoarginines at Phospholipid Membranes: Molecular Dynamics Simulations, Time-Dependent Fluorescence Shift, and Biomimetic Colorimetric Assays
    Journal of Physical Chemistry B 2013, 117, 11530-11540.
    DOI: 10.1021/jp405451e
  • [39] S. Pokorna, P. Jurkiewicz, L. Cwiklik, M. Vazdar, M. Hof, Interactions of monovalent salts with cationic lipid bilayers
    Faraday Discussions 2013, 160, 341-358.
    DOI: 10.1039/C2FD20098H
  • 2012

  • [38] N. Uras-Aytemiz, L. Cwiklik, J.P. Devlin, Tracking all-vapor instant gas-hydrate formation and guest molecule populations: A possible probe for molecules trapped in water nanodroplets
    Journal of Chemical Physics 2012, 137, 204501.
    DOI: 10.1063/1.4767370
  • [37] M. Lis, L. Pintal, J. Swiatek, L. Cwiklik, GPU-Based Massive Parallel Kawasaki Kinetics in the Dynamic Monte Carlo Simulations of Lipid Nanodomains
    Journal of Chemical Theory and Computation 2012, 8, 4758-4765.
    DOI: 10.1021/ct300587w
  • [36] L. Beranova, J. Humpolickova, J. Sykora, A. Benda, L. Cwiklik, P. Jurkiewicz, G. Grobner, M. Hof, Effect of heavy water on phospholipid membranes: experimental confirmation of molecular dynamics simulations
    Physical Chemistry Chemical Physics 2012, 14, 14516-14522.
    DOI: 10.1039/C2CP41275F
  • [35] P. Jurkiewicz, A. Olzynska, L. Cwiklik, E. Conte, P. Jungwirth, F.M. Megli, M. Hof, Biophysics of lipid bilayers containing oxidatively modified phospholipids: Insights from fluorescence and EPR experiments and from MD simulations (Review Paper)
    BBA Biomembranes 2012, 1818, 2388–2402.
    DOI: 10.1016/j.bbamem.2012.05.020
  • [34] M. Vazdar, P. Jurkiewicz, M. Hof, P. Jungwirth, L. Cwiklik, Behavior of 4-hydroxynonenal in phospholipid membranes
    Journal of Physical Chemistry B 2012, 116, 6411-6415.
    DOI: 10.1021/jp3044219
  • [33] P. Jurkiewicz, L. Cwiklik, A. Vojtiskova, P. Jungwirth, M. Hof, Structure, Dynamics, and Hydration of POPC/POPS Bilayers Suspended in NaCl, KCl, and CsCl
    BBA Biomembranes 2012, 1818, 609-616.
    DOI: 10.1016/j.bbamem.2011.11.033
  • [32] M. Khabiri, M. Roeselova, L. Cwiklik, Properties of Oxidized Phospholipid Monolayers: an Atomistic Molecular Dynamics Study
    Chemical Physics Letters 2012, 519-520, 93-99.
    DOI: 10.1016/j.cplett.2011.11.016
  • [31] P. Jurkiewicz, L. Cwiklik, P. Jungwirth, M. Hof, Lipid hydration and mobility: An interplay between fluorescence solvent relaxation experiments and molecular dynamics simulations (Minireview Paper)
    Biochimie 2012, 94, 26-32.
    DOI: 10.1016/j.biochi.2011.06.027
  • 2011

  • [30] M. Lis, A. Wizert, M. Przybylo, M. Langner, J. Swiatek, P. Jungwirth, L. Cwiklik, The Effect of Lipid Oxidation on the Water Permeabilityof Phospholipid Bilayers
    Physical Chemistry Chemical Physics 2011, 13, 17555-17563.
    DOI: 10.1039/C1CP21009B
  • [29] L. Cwiklik, A.J.A. Aquino, M. Vazdar, P. Jurkiewicz, J. Pittner, M. Hof, H. Lischka, Absorption and Fluorescence of PRODAN in Phospholipid Bilayers: A Combined Quantum Mechanics and Classical Molecular Dynamics Study
    Journal of Physical Chemistry A 2011, 115, 11428-11437.
    DOI: 10.1021/jp205966b
  • [28] M. Khabiri, A. Nikouee, L. Cwiklik, S. Grissmer, R. Ettrich, Charybdotoxin unbinding from the mKv1.3 potassium channel: A Combined computational and experimental study
    Journal of Physical Chemistry B 2011, 115, 11490-11500.
    DOI: 10.1021/jp2061909
  • [27] R. Volinsky, L. Cwiklik, P. Jurkiewicz, M. Hof, P. Jungwirth, P. Kinnunen, Oxidized Phosphatidylcholines Facilitate Phospholipid Flip-flop in Liposomes
    Biophysical Journal 2011, 101, 1376-1384.
    DOI: 10.1016/j.bpj.2011.07.051
  • [26] B. Jagoda-Cwiklik, L. Cwiklik, P. Jungwirth, Behavior of the Eigen form of hydronium at the air/water interface
    Journal of Physical Chemistry A 2011, 115, 5881-5886.
    DOI: 10.1021/jp110078s
  • [25] W. Kulig, P. Kubisiak, L. Cwiklik, Steric and electronic effects in the host-guest hydrogen bonding in clathrate hydrates
    Journal of Physical Chemistry A 2011, 115, 6149-6154.
    DOI: 10.1021/jp111245z
  • [24] M. Petrov, L. Cwiklik, P. Jungwirth, Interactions of molecular ions with model phospholipid membranes
    Collection of Czechoslovak Chemical Communications 2011, 76, 695-711.
    DOI: 10.1135/cccc2011026
  • [23] N. Ottosson, L. Cwiklik, J. Soderstrom, O. Bjorneholm, G. Ohrwall, P. Jungwirth, Increased propensity of I(aq)- for the water surface in non-neutral solutions: Implications for the interfacial behavior of H3O(aq)+ and OH(aq)-
    Journal of Physical Chemistry Letters 2011, 2, 972-976.
    DOI: 10.1021/jz2003233
  • 2010

  • [22] L. Cwiklik, J. P. Devlin, Hindering of rotational motion of guest molecules in the Type I clathrate hydrate
    Chemical Physics Letters 2010, 494, 206-212.
    DOI: 10.1016/j.cplett.2010.06.025
  • [21] L. Beranova, L. Cwiklik, P. Jurkiewicz, M. Hof, P. Jungwirth, Oxidation Changes Physical Properties of Phospholipid Bilayers: Flueorescence Spectroscopy and Molecular Simulations
    Langmuir 2010, 26, 6140-6144.
    DOI: 10.1021/la100657a
  • [20] I.A. Monreal, L. Cwiklik, B. Jagoda-Cwiklik, J.P. Devlin, Classical to nonclassical transition of Ether-HCN clathrate hydrates at low temperature
    Journal of Physical Chemistry Letters 2010, 1, 290-294.
    DOI: 10.1021/jz900073n
  • [19] L. Cwiklik, P. Jungwirth, Massive oxidation of phospholipid membranes leads to pore creation and bilayer disintegration (Editor’s Choice paper)
    Chemical Physics Letters 2010, 486, 99-103.
    DOI: 10.1016/j.cplett.2010.01.010
  • 2009

  • [18] V. Buch, J. P. Devlin, I. A. Monreal, B. Jagoda-Cwiklik, N. Aytemiz-Uras, L. Cwiklik, Clathrate-Hydrates with Hydrogen-Bonding Guests (Perspective Paper)
    Physical Chemistry Chemical Physics 2009, 11, 10245-10265.
    DOI: 10.1039/b911600c
  • [17] L. Cwiklik, J.P. Devlin, V. Buch, Hydroxide impurity in ice
    Journal of Physical Chemistry A 2009, 113, 7482-7490.
    DOI: 10.1021/jp900545d
  • [16] L. Cwiklik, V. Buch, Hydroxide trapped in the interior of ice – a computational study (Hot Paper)
    Physical Chemistry Chemical Physics 2009, 11, 1294-1296.
    DOI: 10.1039/b820031a
  • 2008

  • [15] L. Cwiklik, P. Kubisiak, W. Kulig, P. Jungwirth, Reactivity of a sodium atom in vibrationally excited water clusters: An ab initio molecular dynamics study
    Chemical Physics Letters 2008, 460, 112-115.
    DOI: 10.1016/j.cplett.2008.05.075
  • [14] L. Cwiklik, U. Buck, W. Kulig, P. Kubisiak, P. Jungwirth, A Sodium Atom in a Large Water Cluster: Electron Delocalization and Infrared Spectra
    Journal of Chemical Physics 2008, 128, 154306.
    DOI: 10.1063/1.2902970
  • [13] R. Vacha, L. Cwiklik, J. Rezac, P. Hobza, P. Jungwirth, K. Valsaraj, S. Bahr, V. Kempter, Adsorption and Heterogeneous Reactions of Aromatic Hydrocarbons at Environmental Aqueous Surfaces
    Journal of Physical Chemistry A 2008, 112, 4942.
    DOI: 10.1021/jp711813p
  • [12] B. Jagoda-Cwiklik, P. Slavicek, L. Cwiklik, D. Nolting, B. Winter, P. Jungwirth, Ionization of imidazole in the gas phase, microhydrated environments, and in the aqueous solution
    Journal of Physical Chemistry A 2008, 112, 3499.
    DOI: 10.1021/jp711476g
  • [11] E.F. Aziz, S. Eisebitt, W. Eberhard, L. Cwiklik, P. Jungwirth, Existence of extended oriented ion-hydroxide clusters in concentrated aqueous solution
    Journal of Physical Chemistry B 2008, 112, 1262-1266.
    DOI: 10.1021/jp075031w
  • 2007

  • [10] L. Cwiklik, Influence of surface diffusion on catalytic reactivity of spatially inhomogeneous surfaces – mean field modeling
    Chemical Physics Letters 2007, 449, 304-308.
    DOI: 10.1016/j.cplett.2007.10.096
  • [9] B. Jagoda-Cwiklik, L. Cwiklik, Coarse grain simulations of the influence of adsorbate-adsorbate interactions on adsorption and diffusion of n-butane in silicalite-1
    Chemical Physics Letters 2007, 445, 42-46.
    DOI: 10.1016/j.cplett.2007.07.069
  • [8] L. Rulisek, O. Exner, L. Cwiklik, P. Jungwirth, I. Stary, L. Pospisil, Z. Havlas, On the Convergence of the Physico-Chemical Properties of [n]Helicenes
    Journal of Physical Chemistry C 2007, 111, 14948-14955.
    DOI: 10.1021/jp075129a
  • [7] L. Cwiklik, G. Andersson, L.X. Dang, P. Jungwirth, Segregation of inorganic ions at surfaces of polar non-aqueous liquids (Minireview Paper)
    ChemPhysChem 2007, 8, 1457-1463.
    DOI: 10.1002/cphc.200700039
  • [6] G. Andersson, H. Morgner, L. Cwiklik, P. Jungwirth, Anions of Alkali Halide Salts at Surfaces of Formamide Solutions: Concentration Depth Profiles and Surface Topography
    Journal of Physical Chemistry C 2007, 111, 4379-4387.
    DOI: 10.1021/jp067726n
  • 2006

  • [5] B. Winter, M. Faubel, I.V. Hertel, S.E. Bradforth, B. Jagoda-Cwiklik, L. Cwiklik, P. Jungwirth, Electron binding energies of hydrated H3O+ and OH-: Photoelectron spectroscopy of aqueous acid and base solutions combined with electronic calculations
    Journal of the American Chemical Society 2006, 128, 3864-3865.
    DOI: 10.1021/ja0579154
  • 2005

  • [4] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, Influence of the spacing between metal particles on the kinetics of reaction with spillover on the supported metal catalyst
    Applied Surface Science 2005, 252, 778-783.
    DOI: 10.1016/j.apsusc.2005.02.107
  • [3] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, Theoretical study of the influence of confinement and channel blocking on adsorption and diffusion of n-butane in silicalite-1
    Applied Surface Science 2005, 252, 699-706.
    DOI: 10.1016/j.apsusc.2005.02.051
  • 2004

  • [2] L. Cwiklik, B. Jagoda-Cwiklik M. Frankowicz, Influence of spatial distribution of active centers on the kinetics of model heterogeneous catalytic processes
    Surface Science 2004, 572, 318-328.
    DOI: 10.1016/j.susc.2004.09.008
  • 2003

  • [1] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, Simulations of temperature programmed desorption spectra from porous surfaces
    Applied Surface Science 2003, 219, 276-281.
    DOI: 10.1016/S0169-4332(03)00699-8

Conference presentations

  • [57] L. Cwiklik, "Tear Film Lipid Layer - a Molecular-Level View" (invited oral presentation), Structural Transitions of Biomolecules in Theory and Experiment, Feb 23-25, 2017, Hunfeld, Germany
  • [56] L. Cwiklik, "A complex nature of calcium cations interactions with cell membranes" (invited keynote oral presentation), Sept 4-8, 2016, Current Trends in Theoretical Chemistry VII, Krakow, Poland
  • [55] A. Olzynska, A. Wizert, D.R. Iskander, L. Cwiklik, "Lysozyme in the tear film lipid layer" (poster), Feb 27-March 2, 2016, 60th Biophysical Society Annual Meeting, Los Angeles, CA, USA
  • [54] L. Cwiklik, "Molecular-Level Organization of the Tear Film Lipid Layer" (invited oral presentation), 3rd European Joint Theoretical/Experimental Meeting on Membranes, Sept 30 - Oct 2, 2015, Stockholm, Sweden
  • [53] L. Cwiklik, "Interactions of calcium cations with phospholipid membranes" (invited oral presentation), "LEVI 2" Workshop on Membrane-Protein Interactions, May 14-17, 2015, Nove Hrady, Czech Republic
  • [52] L. Cwiklik, M. Olsinova, "LAT Peptide in Model Membranes" (invited oral presentation), Prague Membrane Discussions, March 26, 2015, Prague, Czech Republic
  • [51] A. Wizert, R. Iskander, L. Cwiklik, "Interactions of Lysozyme with the Tear Film Lipid Layer: A Molecular Dynamics Simulation Study" (poster), February 7-11, 2015, 59th Biophysical Society Annual Meeting, Baltimore, MD, USA
  • [50] L. Cwiklik, "Interactions of calcium cations with phospholipid membranes" (invited oral presentation), October 1-3, 2014, 2nd European Joint Theoretical/Experimental Meeting on Membranes, Olomouc, Czech Republic
  • [49] A. Wizert, D.R. Iskander, P. Jungwirth, L. Cwiklik, “Molecular-Level Organization of the Tear Film Lipid Layer: A Molecular Dynamics Simulations Study” (poster), February 15-19, 2014, 58th Biophysical Society Annual Meeting, San Francisco, CA, USA
  • [48] A. Wizert, D.R. Iskander, L. Cwiklik, “Molecular-Level Organization of Lipids in the Tear Film: A Molecular Dynamics Simulations Study” (poster), 21-24 September, 2013, Amsterdam, Netherlands
  • [47] L. Cwiklik, “Molecular-level modeling of lipid membranes: cell membrane under oxidative stress and tear film during eye blinking” (invited oral presentation), Current Trends in Theoretical Chemistry VI, September 1-5, 2013, Krakow, Poland
  • [46] L. Cwiklik, P. Jurkiewicz, M. Vazdar, P. Jungwirth, M. Hof, Short-chain products of lipid oxidation in phospholipid membranes” (invited oral presentation), 6th Wroclaw-Prague Seminar on Biophysics of Lipids, October 7-10, 2012, Wroclaw, Poland
  • [45] S. Pokorna, P. Jurkiewicz, L. Cwiklik, M. Hof, “Interactions of monovalent salts with cationic lipid bilayers” (invited oral presentation, presented by P. Jurkiewicz), Faraday Discussion 160: Ion Specific Hofmeister Effects, September 3-5, 2012, Queens College Oxford, UK
  • [44] L. Cwiklik, P. Jurkiewicz, S. Pokorna, A. Vojtiskova, M. Vazdar, M. Hof, P. Jungwirth, “Ionic Effects in Cationic and Anionic Lipid Membranes” (poster), Gordon Research Conference on Water & Aqueous Solutions, Holderness NH, USA, August 12-17, 2012
  • [43] M. Khabiri, L. Cwiklik, “Structural properties of oxidized lipid monolayers based on atomistic simulations” (invited lecture), American Chemical Society Meeting, Denver, CO, USA, August 28th – September 1st, 2011
  • [42] L. Cwiklik, M. Vazdar, P. Jurkiewicz, “Interactions of Monovalent Ions With Charged Phospholipid Membranes” (oral presentation), Molecular Engineering Summer School, Uto Island, Finland, June 4-11, 2011
  • [41] L. Cwiklik, L. Sobek, M. Vazdar, P. Jurkiewicz, A.J.A. Aquino, H. Lischka, J. Pittner, “Absorption and Fluorescence Spectra of PRODAN in phospholipid membranes: A Mixed TDDFT/MD Study” (poster), 4th JCS Symposium for Theoretical and Computational Chemistry, Liblice, Czech Republic, May 18-20, 2011
  • [40] R. Pleskot, P. Brettlova, L. Cwiklik, M. Potocky, P. Jungwirth, V. Zarsky, “The role of exocyst Sec3 subunit as a landmark protein” (poster, presented by R. Pleskot), Annual Symposium of the Biochemical Society, Cambridge, UK, January 5-7, 2011
  • [39] L. Cwiklik, “Influence of membrane oxidation on phospholipid flip-flop” (oral presentation), 5th Prague-Wroclaw Seminar on Biophysics of Lipids, Prague, Czech Republic, November 16-19, 2010
  • [38] L. Cwiklik, P. Jungwirth, “Oxidation changes hydration and other biophysical properties of phospholipid membranes” (poster), Gordon Research Conference on Water & Aqueous Solutions, Holderness NH, USA, August 8th-13th, 2010
  • [37] L. Cwiklik, “Interfacial properties of oxidized phospholipid bilayers” (oral presentation), US-Poland Workshop and Summer School: Nanoscale Phenomena in Materials and at Interfaces, Cracow, Poland, June 6th-10th, 2010
  • [36] L. Cwiklik, “Oxidized phospholipid membranes” (oral presentation), Mini-symposium on computation of interactions in biological systems, Nove Hrady, Czech Republic, December 12th-13th, 2009
  • [35] L. Cwiklik, “Hydroxide in ice” (oral presentation), Symposium on Interfaces, The Fritz Haber Center for Molecular Dynamics, Jerusalem, Israel, May 25th-26th, 2009
  • [34] L. Cwiklik, V. Buch, “Hydroxide Ion in the Interior of Ice” (poster), Gordon Research Conference on Water & Aqueous Solutions, Holderness NH, USA, July 27th – August 1st, 2008
  • [33] L. Cwiklik, “A sodium atom in water clusters – an ab initio molecular dynamics study” (oral presentation), Current Trends in Theoretical Chemistry V, Krakow, Poland, July 6th – 10th, 2008
  • [32] L. Cwiklik, P. Jungwirth, “Ionization potential of sodium and imidazole in small water clusters – ab-initio molecular dynamics study” (poster), S3C Symposium on Size Selecter Clusters 2007, Brand, Austria, March 12th – 15th, 2007
  • [31] L. Cwiklik, P. Jungwirth, “Surfaces of non-aqueous solutions of sodium iodide” (poster), UK-V4 Frontiers of Science Symposium, Krakow, Poland, February 21st – 23rd, 2007
  • [30] L. Cwiklik, P. Jungwirth, “Surfaces of non-aqueous solutions of sodium iodide” (poster), 6th European Conference on Computational Chemistry, Tale, Slovakia, September 3rd – 7th, 2006
  • [29] M. Frankowicz, L. Cwiklik, B. Jagoda-Cwiklik, M. Chrenowski, “Mesoscopic simulations of physicochemical processes on heterogeneous surfaces” (oral presentation), IMACS 2005 World Congress – Scientific Computation, Applied Mathematics and Simulation, Paris, France, July 11th – 15th, 2005
  • [28] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Distribution Geometry of Active Centers and Efficiency of Heterogeneous Reactions” (poster), 37th Polish Conference on Catalysis, Krakow, Poland, March 15th – 18th, 2005
  • [27] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, “Simulations of adsorption and diffusion in microporous materials using Dynamic Monte Carlo methods” (poster in Polish), 37th Polish Conference on Catalysis, Krakow, Poland, March 15th – 18th, 2005
  • [26] L. Cwiklik, B. Jagoda-CwiklikM. Frankowicz, “Geometric heterogeneities and the kinetics of catalytic reactions with spillover on supported metal catalysts” (poster), Surface Heterogeneity Effects in Adsorption and Catalysis on Solids ISSHAC-5, Gdansk, Poland, August 30th – September 3rd, 2004
  • [25] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, “Monte Carlo simulations of chemical reactions in microporous systems” (poster), Surface Heterogeneity Effects in Adsorption and Catalysis on Solids ISSHAC-5, Gdansk, Poland, August 30th – September 3rd, 2004
  • [24] L. Cwiklik, B. Jagoda-CwiklikM. Frankowicz, “Influence of spatial distribution of active centers on the kinetics of model heterogeneous catalytic processes” (poster in Polish), XLVII Polish Chemical Society Meeting, Wroclaw, Poland, September 12th – 17th, 2004
  • [23] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Modelling of surface reactions with spillover effects using Monte Carlo method” (poster in Polish), 36th National Conference on Catalysis, Krakow, Poland, March 17-19, 2004
  • [22] S. Witkowski, L. Cwiklik, K. Podolska, Z. Sojka, “The mechanism of bonding of chrome(III) complexes with the surface of montmorillonite intercaleted with Al13 complexes” (poster in Polish), 36th National Conference on Catalysis, Krakow, Poland, March 17-19, 2004
  • [21] M. Frankowcz, L. Cwiklik, B. Jagoda-Cwiklik, “Mesoscopic simulation of heterogeneities on reactive surfaces” (oral presentation), XIII Krakow-Jena Seminar on Physical Chemistry, Krakow, Poland, September 30th – October 4th, 2003
  • [20] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Modeling of chemical reactions on inhomogeneous surfaces” (oral presentation in Polish), XLVI Polish Chemical Society Meeting, Lublin, Poland, September 15-18, 2003
  • [19] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, “Simulations of chemical reactions in porous systems” (poster in Polish), XLVI PTCHem and SITPChem Meeting, Lublin, Poland, September 15-18, 2003
  • [18] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Modeling of deer migration based on the concept of active Brownian particles” (poster), International Workshop on Complex Systems in Natural and Social Sciences (CSNSS’2002), Matrafured, Hungary, October 20-24, 2002
  • [17] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Distribution geometry of active centers and efficiency of heterogeneous reaction – stochastic simulations” (oral presentation), 3nd European Interdisciplinary School on Nonlinear Dynamics EUROATTRACTOR, Warsaw, Poland, June 18-27, 2002
  • [16] L. Cwiklik, A. Gora, M. Frankowicz, “Mesoscopic modeling of reactions on V-W-O catalyst surface”, (poster), Current Trends in Theoretical Chemistry IV – Fifty Years of Theoretical Chemistry in Poland (CTTC-IV), Krakow, Poland, June 13-15, 2002
  • [15] L. Cwiklik, B. Jagoda, M. Frankowicz, “Mesoscopic description of heterogeneous reaction kinetics” (poster), Current Trends in Theoretical Chemistry IV – Fifty Years of Theoretical Chemistry in Poland (CTTC-IV), Krakow, Poland, June 13-15, 2002
  • [14] L. Cwiklik, B. Jagoda, M. Frankowicz, “Mesoscopic modeling of surface processes – thermodesorption from porous materials and reactions on surfaces with various active sites geometries” (poster), Stochastic Processes Applied to Complex Systems: Computational Endeavors vs. Conceptual Frontiers, Bydgoszcz, Poland, May 21-23, 2002
  • [13] L. Cwiklik, B. Jagoda, M. Frankowicz, “Temperature Programmed Desorption from porous surface – a stochastic model” (poster), 34th National Conference on Catalysis, Krakow, Poland, March 20-22, 2002
  • [12] L. Cwiklik, B. Jagoda, M. Frankowicz, “Influence of temperature on morphology of Ag(001) surface sputtered with Ar+ ions – molecular dynamics and Monte Carlo simulations” (poster), 34th National Conference on Catalysis, Krakow, Poland, March 20-22, 2002
  • [11] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Mesoscopic modeling of influence of catalyst surface structure on dynamics of heterogeneous reaction” (oral presentation), Information Systems in Chemistry (SIC’2001), Iwonicz-Zdroj, Poland, October 25-27, 2001
  • [10] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Stochastic simulations of ecological system: how to feed deer in an optimal way” (poster), International Workshop on Complex Systems in Natural and Social Sciences (SCNSS’2001), Torun, Poland, October 18-21, 2001
  • [9] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Mesoscopic model of TPD spectra from porous surfaces” (poster), 14th Marian Smoluchowski Symposium on Statistical Physics, Zakopane, Poland, September 9-14, 2001
  • [8] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Stochastic simulations of TPD spectra” (poster), European Science Foundation REACTOR Workshop, Leeds, England, September 7-10, 2001
  • [7] A. Gora, L. Cwiklik, E. Broclawik, M. Frankowicz, “DFT and Cellular Automata Modeling of the V-W-O Catalyst Surface – Water Behavior” (poster), EUROPACAT V, Limerick, Ireland, September 2-7, 2001
  • [6] P. Bialic, L. Cwiklik, B. Jagoda, “Micro- and mesoscopic modeling of surface structure and dynamics” (oral presentation), 2nd European Interdisciplinary School on Nonlinear Dynamics EUROATTRACTOR, Warsaw, Poland, June 19-28, 2001
  • [5] L. Cwiklik, M. Frakowicz, A. Gora, “From micro- to meso-level calculations: DFT and Cellular Automata Modeling of V-W-O Catalyst Surface” (poster), 17th North America Catalysis Society Meeting, Toronto, Canada, June 3-8, 2001
  • [4] A. Gora, L. Cwiklik, M. Frankowicz, “Modelling of water dissociation dynamics on V-W-O surface – DFT and cellular automata” (poster), 33th National Conference on Catalysis, Krakow, Poland, March, 2001
  • [3] P. Bialic, L. Cwiklik, B. Jagoda, M. Frankowicz, “Mesoscopic simulations of heterogeneous catalytic systems” (poster), European Science Foundation REACTOR Workshop, Palermo, Sicily, January 18-20, 2001
  • [2] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Modelling of surface reactions on micro- and mesoscopic level” (poster), International Workshop on Complex Systems in Natural and Social Sciences (SCNSS’2000), Zakopane, Poland, October 5-8, 2000
  • [1] B. Jagoda, L. Cwiklik, P. Bialic, “Cellular automata modelling of surface reactions” (poster), 13th Marian Smoluchowski Symposium on Statistical Physics, Zakopane, Poland, September 6-12, 2000

Other publications

  • [3] L. Cwiklik et al., Spillover on supported catalysts – Dynamic Monte Carlo study, arxiv.org/physics/0409153
  • [2] L. Cwiklik, B. Jagoda-Cwiklik M. Frankowicz, Distribution Geometry of Active Centers and Efficiency of Heterogeneous Reaction, in: Ed. W. Klonowski, Simplicity behind Complexity (ISBN 1-59326-065-2, PABST Science Publishers, 2004)
  • [1] P. Bialic, L. Cwiklik, B. Jagoda, “Application of Cellular Automata Techniques to Modeling of Surface Phenomena in Chemical Systems”, in: Ed. W. Klonowski, From Quanta to Societies (ISBN 1-59326-000-8, PABST Science Publishers, 2002)